STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM87551.1Hypothetical protein. (377 aa)    
Predicted Functional Partners:
SDN67157.1
Signal transduction histidine kinase.
 
 
0.978
SDM87569.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.951
SDN48773.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.909
SDM89831.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.906
SDM37438.1
Two-component system, OmpR family, response regulator VanR.
 0.900
SDM34481.1
PAS domain S-box-containing protein.
 
 
0.896
SDM84413.1
Two-component system, OmpR family, response regulator.
 0.893
SDN16165.1
Two-component system, OmpR family, response regulator.
 0.890
SDM76058.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.889
SDN09728.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.882
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.