STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM88712.1Alpha-1,2-mannosyltransferase. (409 aa)    
Predicted Functional Partners:
SDM88751.1
Taurine dioxygenase, alpha-ketoglutarate-dependent.
 
     0.800
SDM88730.1
4-amino-4-deoxy-L-arabinose transferase.
  
    0.790
SDM88777.1
Pyoverdine/dityrosine biosynthesis protein Dit1.
       0.762
SDN07679.1
Voltage-gated potassium channel.
  
     0.567
SDM80619.1
Type VII secretion protein EccB.
  
 
   0.528
SDN13764.1
Type VII secretion protein EccB; Manually curated.
  
 
   0.522
SDM88683.1
1-acyl-sn-glycerol-3-phosphate acyltransferases.
       0.515
SDN44928.1
Hypothetical protein.
  
     0.473
SDN52206.1
Protein of unknown function.
  
     0.451
SDM18243.1
Alpha-1,6-mannosyltransferase.
 
   
 0.440
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.