STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM90343.1Carbohydrate ABC transporter substrate-binding protein, CUT1 family. (466 aa)    
Predicted Functional Partners:
SDM90303.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.979
SDM90323.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.971
SDM90288.1
ABC-type sugar transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 0.966
SDM90260.1
PHP domain-containing protein.
 
     0.945
SDM84294.1
N-acetylglucosamine transport system permease protein.
  
 0.803
SDM54231.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
 0.760
SDN08705.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
 0.760
SDM90146.1
Alpha-mannosidase.
 
     0.734
SDN23178.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.701
SDM87623.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
 0.700
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.