STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM90948.1PPE family protein. (349 aa)    
Predicted Functional Partners:
SDM75468.1
Serine protease, subtilisin family; Belongs to the peptidase S8 family.
   
  0.784
SDM76619.1
Serine protease, subtilisin family; Belongs to the peptidase S8 family.
   
  0.784
SDM90973.1
EspG family protein.
       0.773
SDM90907.1
Hypothetical protein.
       0.590
SDM90926.1
Protein of unknown function.
       0.590
SDM90989.1
Neutral ceramidase.
       0.532
SDN10621.1
Hypothetical protein.
    
   0.480
SDN33696.1
Unsaturated chondroitin disaccharide hydrolase.
    
   0.480
SDN13792.1
Type VII secretion protein EccE.
   
   0.432
SDN11673.1
Tricorn protease; Degrades oligopeptides; Belongs to the peptidase S41B family.
   
   0.419
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.