STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM91577.1Methyltransferase domain-containing protein. (244 aa)    
Predicted Functional Partners:
SDN30028.1
4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family.
   
  0.739
SDN66254.1
Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
   
  0.739
SDM91602.1
Cellulose biosynthesis protein BcsQ.
  
    0.625
SDM93214.1
Protoporphyrin IX magnesium-chelatase.
  
 0.605
SDM91644.1
Endonuclease-8; Belongs to the FPG family.
       0.573
SDM91618.1
Threonine/homoserine/homoserine lactone efflux protein.
       0.558
SDN45979.1
Hypothetical protein.
  
     0.551
SDM25796.1
Streptomyces sporulation and cell division protein, SsgA.
  
     0.546
SDM79821.1
Streptomyces sporulation and cell division protein, SsgA.
  
     0.530
SDN68397.1
Streptomyces sporulation and cell division protein, SsgA.
  
     0.522
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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