STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM92012.1Predicted ATPase. (776 aa)    
Predicted Functional Partners:
SDN67157.1
Signal transduction histidine kinase.
  
 0.964
SDM15622.1
DNA-binding transcriptional activator of the SARP family.
 
    0.953
SDM34481.1
PAS domain S-box-containing protein.
   
 0.918
SDM17634.1
Tetratricopeptide repeat-containing protein.
  
 
   0.798
SDN37862.1
DNA-binding transcriptional activator of the SARP family.
  
   0.748
SDM23515.1
DNA-binding transcriptional activator of the SARP family.
  
   0.747
SDN06917.1
DNA-binding transcriptional activator of the SARP family.
  
    0.738
SDM59844.1
DNA-binding transcriptional activator of the SARP family.
  
   0.729
SDN37877.1
DNA-binding transcriptional activator of the SARP family.
  
   0.729
SDM57290.1
DNA-binding transcriptional activator of the SARP family; Manually curated.
  
   0.728
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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