STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM98211.1DNA-binding transcriptional regulator, MarR family. (167 aa)    
Predicted Functional Partners:
SDN66081.1
Cell envelope-related function transcriptional attenuator common domain-containing protein.
   
    0.777
SDM18257.1
Predicted transcriptional regulator, ArsR family.
   
    0.736
cobB
NAD-dependent protein deacetylase, SIR2 family; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.
   
    0.719
SDN34659.1
NAD-dependent protein deacetylase, SIR2 family.
   
    0.719
SDM27013.1
acetyl-CoA synthetase.
      0.702
SDM68322.1
Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain.
   
    0.684
SDM88506.1
Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain.
   
    0.684
SDM98187.1
Uncharacterized protein, MTH1187 family.
       0.651
SDM57839.1
DNA-binding transcriptional regulator, AcrR family; Manually curated.
   
    0.610
SDM60120.1
DNA-binding transcriptional regulator, AcrR family.
   
    0.610
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.