STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM98576.1SPW repeat-containing protein. (145 aa)    
Predicted Functional Partners:
SDM98551.1
DNA-binding transcriptional regulator, AcrR family.
 
     0.824
SDN44586.1
Lipase (class 3).
  
     0.552
SDM45919.1
Hypothetical protein.
  
     0.546
SDM77730.1
RES domain-containing protein.
  
     0.524
SDM98600.1
crotonyl-CoA carboxylase/reductase.
       0.504
SDM98614.1
Hypothetical protein.
 
     0.503
SDN25757.1
Hypothetical protein.
  
     0.497
SDN39088.1
N-acetylglutamate synthase, GNAT family.
  
     0.479
SDN22054.1
TIGR03086 family protein.
  
     0.473
SDM45381.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
  
     0.468
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.