STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM98776.1Transcriptional regulator, contains XRE-family HTH domain. (194 aa)    
Predicted Functional Partners:
SDM98825.1
Thioredoxin reductase.
 
     0.717
SDM98753.1
GrpB domain, predicted nucleotidyltransferase, UPF0157 family.
       0.692
SDM98735.1
Hypothetical protein.
       0.676
SDM98844.1
4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family.
 
 
   0.671
SDM98864.1
Proline racemase; Belongs to the proline racemase family.
       0.671
SDM98802.1
Glycine/D-amino acid oxidase.
  
    0.649
SDN67908.1
3-oxoadipate enol-lactonase / 4-carboxymuconolactone decarboxylase.
    
 0.604
SDM67869.1
AraC-like ligand binding domain-containing protein.
  
 0.574
SDM98885.1
Xaa-Pro aminopeptidase.
    
  0.559
SDN63505.1
Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
  0.500
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.