STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN01705.1Protein of unknown function. (144 aa)    
Predicted Functional Partners:
SDN01685.1
Hypothetical protein.
 
  
 0.974
SDN01725.1
Hypothetical protein.
 
  
 0.957
SDN01739.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
     0.946
SDM16553.1
Hypothetical protein.
 
  
 0.893
SDN37690.1
Hypothetical protein.
 
  
 0.893
SDM52959.1
Amino acid adenylation domain-containing protein.
  
 
 0.836
SDM97371.1
Electron transfer flavoprotein alpha subunit apoprotein.
  
 0.830
SDM16592.1
Hypothetical protein.
 
  
 0.819
SDN37653.1
Hypothetical protein.
 
  
 0.819
SDM16607.1
Signal transduction histidine kinase.
 
 
 0.818
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.