STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN05397.1Phage integrase, N-terminal SAM-like domain; Belongs to the 'phage' integrase family. (401 aa)    
Predicted Functional Partners:
SDN05435.1
DNA methylase; Belongs to the N(4)/N(6)-methyltransferase family.
 
    0.606
SDN05553.1
AAA-like domain-containing protein.
 
     0.517
SDM83722.1
Acetyltransferase (GNAT) domain-containing protein.
  
     0.498
SDN05421.1
DNA binding domain-containing protein, excisionase family.
       0.494
SDN05514.1
Uncharacterized membrane protein.
  
     0.463
SDN05530.1
PrgI family protein.
  
     0.462
SDM51320.1
AraC-type DNA-binding protein.
  
     0.447
SDN05589.1
AAA-like domain-containing protein.
 
     0.437
SDM52397.1
L-amino acid N-acyltransferase YncA.
  
    0.432
SDN58795.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
  
     0.424
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.