STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN07939.1TIGR02569 family protein. (254 aa)    
Predicted Functional Partners:
SDN08232.1
Hypothetical protein.
 
     0.823
SDN15742.1
Hypothetical protein.
  
     0.773
SDN40606.1
Hypothetical protein.
 
     0.773
SDN13529.1
Alpha/beta hydrolase family protein.
  
     0.769
SDN41786.1
Hypothetical protein.
  
     0.769
SDN51430.1
Hypothetical protein.
  
     0.769
SDN61382.1
Hypothetical protein.
  
     0.767
SDN13157.1
Hypothetical protein.
  
     0.765
SDN48528.1
Protein of unknown function.
  
     0.760
SDN22202.1
Hypothetical protein.
  
     0.759
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.