STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN08594.1Predicted phosphoesterase. (226 aa)    
Predicted Functional Partners:
SDN08606.1
Hypothetical protein.
     0.979
SDN08628.1
Protein of unknown function.
       0.757
SDN08646.1
Alpha/beta hydrolase fold.
       0.598
SDN09837.1
Thiamine transport system substrate-binding protein.
  
     0.573
SDN08567.1
Sugar lactone lactonase YvrE.
       0.551
SDN44586.1
Lipase (class 3).
  
     0.519
SDN34515.1
FhuF 2Fe-2S C-terminal domain-containing protein.
  
     0.490
SDN09817.1
Thiamine transport system permease protein.
  
     0.447
SDM72357.1
Adenylate cyclase, class 3.
  
  
  0.444
SDM27789.1
Hypothetical protein.
  
     0.438
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.