STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN09131.1Protein of unknown function. (55 aa)    
Predicted Functional Partners:
SDN32786.1
Hypothetical protein.
  
     0.773
SDN09117.1
Leucyl aminopeptidase; Belongs to the peptidase M17 family.
       0.577
SDN09184.1
DNA-3-methyladenine glycosylase I.
     
 0.551
SDN09144.1
Transcriptional regulator, PaaX family.
       0.547
SDM86155.1
Hypothetical protein.
  
     0.536
SDN09163.1
Enoyl-CoA hydratase.
       0.512
SDN44691.1
Two-component system, OmpR family, sensor histidine kinase MtrB.
  
     0.496
SDN33375.1
Helicase/secretion neighborhood CpaE-like protein.
  
     0.490
SDN07365.1
Hypothetical protein.
  
     0.458
SDN12511.1
Hypothetical protein.
  
     0.451
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.