STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN10639.1Diadenosine tetraphosphatase ApaH/serine/threonine protein phosphatase, PP2A family. (261 aa)    
Predicted Functional Partners:
SDM25774.1
3' terminal RNA ribose 2'-O-methyltransferase Hen1.
 
 
   0.892
SDN10621.1
Hypothetical protein.
       0.561
SDN60811.1
Methyltransferase domain-containing protein.
  
 
   0.559
SDM77471.1
Ubiquinone/menaquinone biosynthesis C-methylase UbiE.
  
 
   0.556
SDM77493.1
Methyltransferase domain-containing protein.
  
 
   0.556
SDN01889.1
Methyltransferase domain-containing protein.
  
 
   0.553
SDN27561.1
Methyltransferase domain-containing protein.
   
   0.534
SDM18906.1
Hypothetical protein.
    
   0.495
SDM28210.1
Methyltransferase domain-containing protein.
    
   0.495
SDM37123.1
Amino acid adenylation domain-containing protein.
    
   0.495
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.