STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN11575.1Predicted outer membrane protein. (216 aa)    
Predicted Functional Partners:
SDN11590.1
Protein of unknown function.
 
     0.956
SDN11654.1
Predicted lipoprotein with conserved Yx(FWY)xxD motif.
 
     0.803
SDN11632.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
       0.703
SDN11616.1
Ferredoxin.
       0.699
SDM59400.1
Protein of unknown function.
  
     0.583
SDN18230.1
Beta-lactamase enzyme family protein.
  
     0.572
SDN29815.1
Hypothetical protein.
  
     0.566
SDM80847.1
AAA ATPase domain-containing protein.
  
     0.521
SDM82298.1
Hypothetical protein.
  
     0.455
SDM45469.1
DNA binding domain-containing protein, excisionase family.
  
     0.448
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.