STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN16041.1Cytochrome c biogenesis protein. (518 aa)    
Predicted Functional Partners:
SDN16022.1
Cytochrome c-type biogenesis protein CcsB.
  
 0.998
SDN16060.1
Cytochrome c-type biogenesis protein.
 
  
 0.986
SDN16326.1
Uroporphyrinogen III methyltransferase / synthase.
 
    0.872
SDN56852.1
Cytochrome c biogenesis protein CcdA.
  
  
 0.863
SDN16083.1
Thiol-disulfide isomerase or thioredoxin.
 
  
 0.775
SDN16115.1
Broad specificity phosphatase PhoE.
 
    0.771
SDN59874.1
Menaquinol-cytochrome c reductase cytochrome c1 subunit precursor.
  
     0.763
SDN59838.1
Menaquinol-cytochrome c reductase cytochrome b subunit precursor.
  
   
 0.758
SDN59759.1
Cytochrome c oxidase subunit IV; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
  
     0.753
SDN59845.1
Menaquinol-cytochrome c reductase iron-sulfur subunit precursor.
  
     0.751
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.