STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN16766.1Protein of unknown function. (310 aa)    
Predicted Functional Partners:
SDN16787.1
Putative sensory transduction regulator.
       0.630
mshA
D-inositol-3-phosphate glycosyltransferase; Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2- deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway.
       0.622
SDN16823.1
Pimeloyl-ACP methyl ester carboxylesterase; Manually curated.
       0.615
SDN39267.1
RNA polymerase sigma-70 factor, ECF subfamily.
 
   0.505
SDN20690.1
RNA polymerase sigma-70 factor, sigma-E family; Belongs to the sigma-70 factor family. ECF subfamily.
  
   0.504
SDN16833.1
Lipoprotein-anchoring transpeptidase ErfK/SrfK.
       0.463
SDN16858.1
Hypothetical protein.
 
     0.447
SDM58668.1
Hypothetical protein.
  
   0.433
SDM58695.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
   0.433
SDM74487.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
   0.433
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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