STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN17893.1Glycosyl hydrolases family 31; Belongs to the glycosyl hydrolase 31 family. (905 aa)    
Predicted Functional Partners:
SDM44359.1
4-alpha-glucanotransferase.
    
 0.887
SDN61428.1
Alpha-galactosidase.
 
  
  0.856
SDN40329.1
Alpha-galactosidase.
    
 0.823
SDM56696.1
Hypothetical protein.
     
 0.819
SDM97988.1
Trehalose synthase.
    
 0.818
SDN27363.1
Alpha-amylase.
    
 0.818
SDN62893.1
Glycosyl-hydrolase 97 C-terminal, oligomerisation.
  
  
  0.790
SDN53268.1
Beta-glucosidase.
 
  
  0.786
SDM56136.1
Alpha-glucosidase.
  
  
  0.781
SDN52378.1
Alpha-1,6-glucosidases, pullulanase-type; Belongs to the glycosyl hydrolase 13 family.
 
  
 0.771
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.