STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN18133.1Two component transcriptional regulator, LuxR family. (201 aa)    
Predicted Functional Partners:
SDN18113.1
Two-component system, NarL family, sensor histidine kinase DesK.
  0.980
SDN67157.1
Signal transduction histidine kinase.
  
 0.963
SDN50185.1
Two-component system, NarL family, sensor histidine kinase DesK.
 
  0.927
SDM34481.1
PAS domain S-box-containing protein.
   
 0.916
SDM38526.1
Two-component system, NarL family, sensor histidine kinase DesK.
 
  0.902
SDN19711.1
Signal transduction histidine kinase.
  
  0.815
SDN65468.1
Signal transduction histidine kinase.
  
  0.783
SDN39599.1
Signal transduction histidine kinase.
  
  0.782
SDN62742.1
Signal transduction histidine kinase.
  
  0.780
SDM53917.1
Signal transduction histidine kinase.
  
  0.774
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.