STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN18149.1Membrane fusion protein, macrolide-specific efflux system. (392 aa)    
Predicted Functional Partners:
SDN18190.1
Putative ABC transport system permease protein.
 
 
 0.988
SDN18164.1
Putative ABC transport system ATP-binding protein.
 
 
 0.971
SDM46483.1
Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.930
SDN48858.1
Putative ABC transport system permease protein.
 
 
 0.921
SDM41504.1
Putative ABC transport system permease protein.
  
 
 0.915
SDN46163.1
Putative ABC transport system permease protein.
 
 
 0.860
SDN18214.1
Hypothetical protein.
       0.818
SDM36698.1
Putative ABC transport system permease protein.
  
 
 0.773
SDN48838.1
Putative ABC transport system ATP-binding protein.
 
 
 0.766
SDM21054.1
Putative ABC transport system permease protein.
  
 
 0.733
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.