STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN19440.1Glycosyl hydrolases family 6; Belongs to the glycosyl hydrolase family 6. (323 aa)    
Predicted Functional Partners:
SDN19452.1
Broad-specificity cellobiase.
    
  0.901
SDM97126.1
N-terminal ig-like domain of cellulase.
   
 0.766
SDN27920.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
  
  
 0.759
SDN19474.1
Cellobiose ABC transporter membrane protein.
       0.757
SDN19492.1
Cellobiose transport system permease protein.
       0.757
SDN19510.1
Cellobiose transport system substrate-binding protein.
       0.757
SDN33696.1
Unsaturated chondroitin disaccharide hydrolase.
  
  0.754
SDN42093.1
Chitinase.
 
  
 0.747
SDN66578.1
Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
 
 0.725
SDM17163.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
    
 0.721
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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