STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN19452.1Broad-specificity cellobiase. (451 aa)    
Predicted Functional Partners:
SDN19440.1
Glycosyl hydrolases family 6; Belongs to the glycosyl hydrolase family 6.
    
  0.901
SDN19417.1
Endoglucanase; Belongs to the glycosyl hydrolase family 6.
    
  0.850
SDN19510.1
Cellobiose transport system substrate-binding protein.
 
     0.820
SDN19492.1
Cellobiose transport system permease protein.
     
 0.800
SDN19474.1
Cellobiose ABC transporter membrane protein.
       0.776
SDN70454.1
PTS system N-acetylglucosamine-specific IIA component, Glc family.
  
 
 0.742
SDN03659.1
Hypothetical protein.
   
   0.741
SDN38859.1
Aldose 1-epimerase.
  
 
 0.734
SDM52237.1
Glycosyltransferase family 36.
    
 0.733
SDN17893.1
Glycosyl hydrolases family 31; Belongs to the glycosyl hydrolase 31 family.
  
 0.731
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.