STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN19578.1Putative tricarboxylic transport membrane protein. (488 aa)    
Predicted Functional Partners:
SDN19621.1
Putative tricarboxylic transport membrane protein.
 
  
 0.975
SDN19598.1
Putative tricarboxylic transport membrane protein.
 
 
 0.973
SDN37458.1
Putative tricarboxylic transport membrane protein.
 
  
 0.899
SDN37513.1
Putative tricarboxylic transport membrane protein.
 
  
 0.899
SDN37527.1
Putative tricarboxylic transport membrane protein.
 
 
 0.894
SDN37472.1
Putative tricarboxylic transport membrane protein.
 
 
 0.891
SDN19734.1
Sensor histidine kinase regulating citrate/malate metabolism.
 
     0.567
SDN19547.1
Hypothetical protein.
       0.559
SDN19560.1
RNA polymerase sigma-70 factor, sigma-E family; Belongs to the sigma-70 factor family. ECF subfamily.
       0.559
SDN19760.1
Response regulator of citrate/malate metabolism.
 
     0.504
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.