Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDM65681.1 | SDN24532.1 | SAMN04489726_2750 | SAMN04489726_5695 | DNA polymerase-3 subunit alpha. | Single-strand binding protein. | 0.890 |
| SDM65681.1 | SDN24606.1 | SAMN04489726_2750 | SAMN04489726_5698 | DNA polymerase-3 subunit alpha. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | 0.478 |
| SDM65681.1 | SDN51320.1 | SAMN04489726_2750 | SAMN04489726_6948 | DNA polymerase-3 subunit alpha. | Single-strand DNA-binding protein. | 0.860 |
| SDM65681.1 | dnaE2 | SAMN04489726_2750 | SAMN04489726_2008 | DNA polymerase-3 subunit alpha. | Error-prone DNA polymerase, DnaE-like; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | 0.741 |
| SDM65681.1 | dnaX | SAMN04489726_2750 | SAMN04489726_6037 | DNA polymerase-3 subunit alpha. | DNA polymerase III, tau subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.984 |
| SDN20568.1 | SDN24532.1 | SAMN04489726_5498 | SAMN04489726_5695 | DNA polymerase III, alpha subunit. | Single-strand binding protein. | 0.892 |
| SDN20568.1 | SDN24606.1 | SAMN04489726_5498 | SAMN04489726_5698 | DNA polymerase III, alpha subunit. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | 0.478 |
| SDN20568.1 | SDN51320.1 | SAMN04489726_5498 | SAMN04489726_6948 | DNA polymerase III, alpha subunit. | Single-strand DNA-binding protein. | 0.860 |
| SDN20568.1 | dnaE2 | SAMN04489726_5498 | SAMN04489726_2008 | DNA polymerase III, alpha subunit. | Error-prone DNA polymerase, DnaE-like; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | 0.742 |
| SDN20568.1 | dnaX | SAMN04489726_5498 | SAMN04489726_6037 | DNA polymerase III, alpha subunit. | DNA polymerase III, tau subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.984 |
| SDN24532.1 | SDM65681.1 | SAMN04489726_5695 | SAMN04489726_2750 | Single-strand binding protein. | DNA polymerase-3 subunit alpha. | 0.890 |
| SDN24532.1 | SDN20568.1 | SAMN04489726_5695 | SAMN04489726_5498 | Single-strand binding protein. | DNA polymerase III, alpha subunit. | 0.892 |
| SDN24532.1 | SDN24606.1 | SAMN04489726_5695 | SAMN04489726_5698 | Single-strand binding protein. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | 0.901 |
| SDN24532.1 | SDN51320.1 | SAMN04489726_5695 | SAMN04489726_6948 | Single-strand binding protein. | Single-strand DNA-binding protein. | 0.886 |
| SDN24532.1 | dnaE2 | SAMN04489726_5695 | SAMN04489726_2008 | Single-strand binding protein. | Error-prone DNA polymerase, DnaE-like; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | 0.881 |
| SDN24532.1 | dnaX | SAMN04489726_5695 | SAMN04489726_6037 | Single-strand binding protein. | DNA polymerase III, tau subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.939 |
| SDN24532.1 | priA | SAMN04489726_5695 | SAMN04489726_7887 | Single-strand binding protein. | Replication restart DNA helicase PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. | 0.936 |
| SDN24532.1 | rplI | SAMN04489726_5695 | SAMN04489726_5697 | Single-strand binding protein. | LSU ribosomal protein L9P; Binds to the 23S rRNA. | 0.888 |
| SDN24532.1 | rpsF | SAMN04489726_5695 | SAMN04489726_5694 | Single-strand binding protein. | Small subunit ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.990 |
| SDN24532.1 | rpsR | SAMN04489726_5695 | SAMN04489726_5696 | Single-strand binding protein. | SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.852 |
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