STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN24872.1Beta-galactosidase. (1217 aa)    
Predicted Functional Partners:
SDN61428.1
Alpha-galactosidase.
  
  
  0.912
SDN38859.1
Aldose 1-epimerase.
  
 
 0.889
SDN40329.1
Alpha-galactosidase.
    
 0.888
SDM17320.1
Beta-galactosidase.
 
 
 0.882
SDN67572.1
Beta-galactosidase.
 
 
 0.882
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
    
 0.877
SDN26761.1
FAD-linked oxidoreductase.
    
  0.863
SDM65817.1
L-ribulose 5-phosphate 4-epimerase.
  
 
  0.767
SDN62651.1
Galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
 
  
 0.752
SDN36162.1
6-phospho-beta-glucosidase.
    
  0.723
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.