STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN25816.1N-acetylmuramoyl-L-alanine amidase. (382 aa)    
Predicted Functional Partners:
SDN32051.1
N-acetylmuramoyl-L-alanine amidase.
  
  
0.946
SDN62591.1
3',5'-cyclic AMP phosphodiesterase CpdA.
    
  0.888
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
  
   
 0.837
SDN65360.1
Rare lipoprotein A.
  
 
 0.832
SDN09748.1
Outer membrane lipoprotein-sorting protein.
   
   0.824
SDN00765.1
Membrane associated serine protease, rhomboid family.
  
   0.798
SDN26329.1
Membrane associated serine protease, rhomboid family.
  
   0.798
SDN41406.1
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.
  
 
 0.745
SDN41428.1
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6).
  
 
 0.743
SDN32653.1
Membrane carboxypeptidase (penicillin-binding protein).
 
 
 0.739
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.