STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN29886.1Glycosyltransferase involved in cell wall bisynthesis. (251 aa)    
Predicted Functional Partners:
SDM24346.1
GtrA-like protein.
  
 
  0.781
SDN29898.1
L-2-hydroxyglutarate oxidase.
       0.776
SDN29925.1
Hypothetical protein.
       0.678
SDN29864.1
Hypothetical protein.
  
 
  0.600
SDM17163.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
  
 
 0.553
SDN56406.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
  
 0.532
SDM24322.1
4-amino-4-deoxy-L-arabinose transferase.
  
 
  0.522
SDM24374.1
4-amino-4-deoxy-L-arabinose transferase.
  
 
  0.502
SDM24804.1
Dolichol-phosphate mannosyltransferase.
  
     0.481
SDM40338.1
4-amino-4-deoxy-L-arabinose transferase.
  
 
  0.478
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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