Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDM30051.1 | SDN00861.1 | SAMN04489726_0868 | SAMN04489726_4437 | Glycerol kinase; Belongs to the FGGY kinase family. | Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif. | 0.990 |
| SDM30051.1 | SDN08985.1 | SAMN04489726_0868 | SAMN04489726_4855 | Glycerol kinase; Belongs to the FGGY kinase family. | Serine protease, S1-C subfamily, contains C-terminal PDZ domain. | 0.784 |
| SDM30051.1 | SDN33106.1 | SAMN04489726_0868 | SAMN04489726_6089 | Glycerol kinase; Belongs to the FGGY kinase family. | Colicin V production protein. | 0.784 |
| SDM30051.1 | SDN40386.1 | SAMN04489726_0868 | SAMN04489726_6460 | Glycerol kinase; Belongs to the FGGY kinase family. | Putative serine protease PepD. | 0.784 |
| SDM30051.1 | arc | SAMN04489726_0868 | SAMN04489726_0338 | Glycerol kinase; Belongs to the FGGY kinase family. | Proteasome-associated ATPase; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. | 0.991 |
| SDN00861.1 | SDM30051.1 | SAMN04489726_4437 | SAMN04489726_0868 | Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif. | Glycerol kinase; Belongs to the FGGY kinase family. | 0.990 |
| SDN00861.1 | SDN08985.1 | SAMN04489726_4437 | SAMN04489726_4855 | Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif. | Serine protease, S1-C subfamily, contains C-terminal PDZ domain. | 0.750 |
| SDN00861.1 | SDN33050.1 | SAMN04489726_4437 | SAMN04489726_6087 | Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif. | Thiol-disulfide isomerase or thioredoxin. | 0.444 |
| SDN00861.1 | SDN33106.1 | SAMN04489726_4437 | SAMN04489726_6089 | Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif. | Colicin V production protein. | 0.780 |
| SDN00861.1 | SDN40386.1 | SAMN04489726_4437 | SAMN04489726_6460 | Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif. | Putative serine protease PepD. | 0.750 |
| SDN00861.1 | arc | SAMN04489726_4437 | SAMN04489726_0338 | Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif. | Proteasome-associated ATPase; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. | 0.997 |
| SDN00861.1 | glpK | SAMN04489726_4437 | SAMN04489726_6559 | Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.990 |
| SDN08985.1 | SDM30051.1 | SAMN04489726_4855 | SAMN04489726_0868 | Serine protease, S1-C subfamily, contains C-terminal PDZ domain. | Glycerol kinase; Belongs to the FGGY kinase family. | 0.784 |
| SDN08985.1 | SDN00861.1 | SAMN04489726_4855 | SAMN04489726_4437 | Serine protease, S1-C subfamily, contains C-terminal PDZ domain. | Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif. | 0.750 |
| SDN08985.1 | SDN33106.1 | SAMN04489726_4855 | SAMN04489726_6089 | Serine protease, S1-C subfamily, contains C-terminal PDZ domain. | Colicin V production protein. | 0.739 |
| SDN08985.1 | arc | SAMN04489726_4855 | SAMN04489726_0338 | Serine protease, S1-C subfamily, contains C-terminal PDZ domain. | Proteasome-associated ATPase; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. | 0.958 |
| SDN08985.1 | glpK | SAMN04489726_4855 | SAMN04489726_6559 | Serine protease, S1-C subfamily, contains C-terminal PDZ domain. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.784 |
| SDN08985.1 | secD | SAMN04489726_4855 | SAMN04489726_0482 | Serine protease, S1-C subfamily, contains C-terminal PDZ domain. | SecD/SecF fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.788 |
| SDN33050.1 | SDN00861.1 | SAMN04489726_6087 | SAMN04489726_4437 | Thiol-disulfide isomerase or thioredoxin. | Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif. | 0.444 |
| SDN33050.1 | SDN33078.1 | SAMN04489726_6087 | SAMN04489726_6088 | Thiol-disulfide isomerase or thioredoxin. | NUDIX domain-containing protein. | 0.965 |
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