STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN34730.1Hypothetical protein. (168 aa)    
Predicted Functional Partners:
SDN34753.1
A/G-specific DNA-adenine glycosylase.
       0.795
SDM78205.1
Hypothetical protein.
  
     0.761
SDN57575.1
TIGR02677 family protein.
  
     0.753
SDN57551.1
TIGR02678 family protein.
  
     0.752
SDN57532.1
TIGR02680 family protein.
  
     0.740
SDN49722.1
Hypothetical protein.
  
     0.735
SDN60609.1
Protein of unknown function.
  
     0.722
SDN46212.1
Hypothetical protein.
  
     0.603
SDN54439.1
Antibiotic biosynthesis monooxygenase.
  
     0.600
SDN40991.1
LexA-binding, inner membrane-associated putative hydrolase.
  
     0.583
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.