STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN36101.1Lysophospholipase L1. (256 aa)    
Predicted Functional Partners:
SDN15663.1
Phosphatidylinositol alpha 1,6-mannosyltransferase.
 
      0.899
SDM15334.1
DNA polymerase-1.
  
     0.650
SDN26781.1
D-serine deaminase, pyridoxal phosphate-dependent.
  
     0.626
SDN36220.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
     0.587
SDN36162.1
6-phospho-beta-glucosidase.
    
  0.539
SDN36122.1
BadF-type ATPase.
       0.527
SDN36138.1
Hypothetical protein.
       0.527
SDN36180.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
       0.527
SDN36201.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
       0.527
SDN26761.1
FAD-linked oxidoreductase.
  
     0.503
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.