STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN37066.1LytR cell envelope-related transcriptional attenuator. (202 aa)    
Predicted Functional Partners:
SDN37033.1
Protein of unknown function.
  
    0.777
SDN41732.1
Hypothetical protein.
  
     0.740
SDN08232.1
Hypothetical protein.
  
     0.729
SDN28431.1
Protein of unknown function.
  
     0.725
SDN13157.1
Hypothetical protein.
  
     0.712
SDN21075.1
Hypothetical protein.
  
     0.709
SDM67352.1
Hypothetical protein.
  
     0.702
SDM94794.1
Hypothetical protein.
  
     0.670
SDN38573.1
Protein of unknown function.
  
     0.667
SDN61382.1
Hypothetical protein.
  
     0.649
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.