STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN38605.1ATP-binding cassette, subfamily B. (595 aa)    
Predicted Functional Partners:
SDM39281.1
ATP-binding cassette, subfamily B, IrtB.
 
 
 
0.922
SDN38589.1
ABC-type multidrug transport system, ATPase and permease component.
 
    
0.816
SDM32612.1
ABC-type bacteriocin/lantibiotic exporter, contains an N-terminal double-glycine peptidase domain; Manually curated.
 
 
 
0.766
SDN03352.1
Acyl transferase domain-containing protein.
  
 0.729
SDM52959.1
Amino acid adenylation domain-containing protein.
 
 0.697
SDM29007.1
Phosphopantetheine attachment site.
  
 0.693
SDM36680.1
Putative ABC transport system ATP-binding protein.
 
    
0.678
SDN29003.1
ATP-binding cassette, subfamily C, CydCD.
  
 
 
0.613
SDN24164.1
Hsp70 protein.
  
  0.595
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
  0.590
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.