STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN39765.1DNA-binding transcriptional regulator, AcrR family. (184 aa)    
Predicted Functional Partners:
SDN39786.1
ATP-binding cassette, subfamily B.
 
     0.828
SDN39741.1
Alcohol dehydrogenase.
       0.568
SDM27819.1
Hypothetical protein.
  
     0.528
SDN04997.1
RHS repeat-associated core domain-containing protein.
  
     0.528
SDN19957.1
Pectate lyase superfamily protein.
  
     0.444
SDM51055.1
Hypothetical protein.
  
     0.427
SDM77089.1
Hypothetical protein.
  
     0.427
SDN44106.1
Hypothetical protein.
  
     0.423
SDN04960.1
Subtilase family protein.
  
     0.409
SDN39722.1
Erythromycin esterase.
       0.403
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.