STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN41638.1Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family. (377 aa)    
Predicted Functional Partners:
SDN41626.1
Nucleoside ABC transporter ATP-binding protein.
 
 0.999
SDN41664.1
Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
SDN41601.1
Nucleoside-binding protein.
 
 
 0.993
SDN41688.1
Cytidine deaminase.
 
  
 0.794
SDN36434.1
Simple sugar transport system ATP-binding protein.
  
  0.790
SDM15457.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
  
  0.772
SDM65885.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
  
  0.766
SDM26732.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
  
  0.757
rbsA
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  
  0.752
SDN41708.1
Thymidine phosphorylase.
 
   
 0.748
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.