STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN42700.1Protein of unknown function. (209 aa)    
Predicted Functional Partners:
SDN42675.1
Protein N-acetyltransferase, RimJ/RimL family.
       0.796
SDN42740.1
Protein of unknown function.
 
    
0.749
SDN42723.1
Protein of unknown function.
 
    
0.738
SDN42655.1
Protein of unknown function.
       0.717
SDN27135.1
RecB family nuclease, putative, TM0106 family.
  
     0.654
SDN18190.1
Putative ABC transport system permease protein.
   
    0.626
SDN46163.1
Putative ABC transport system permease protein.
   
    0.626
SDN48858.1
Putative ABC transport system permease protein.
   
    0.626
SDN42636.1
Hypothetical protein.
       0.553
SDN42763.1
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED.
       0.548
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.