STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN44016.1Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase. (359 aa)    
Predicted Functional Partners:
SDM18345.1
Nitrogen fixation protein NifU.
   
   0.795
SDN01101.1
Phosphoserine phosphatase.
    
 0.736
SDN10912.1
Cystathionine beta-synthase.
    
  0.691
SDN20418.1
V8-like Glu-specific endopeptidase; Belongs to the peptidase S1B family.
  
     0.654
SDM42336.1
Protein-tyrosine phosphatase.
  
 
  0.585
SDN44039.1
3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase.
       0.563
SDM18001.1
Phosphatidylserine decarboxylase.
  
 0.539
SDN62203.1
DNA-binding transcriptional regulator, MarR family.
  
     0.527
SDM34119.1
Protein of unknown function.
  
     0.523
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
  0.523
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.