STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN44928.1Hypothetical protein. (167 aa)    
Predicted Functional Partners:
SDN44909.1
Acyltransferase, WS/DGAT/MGAT; Belongs to the long-chain O-acyltransferase family.
     
 0.861
SDN60661.1
Acetyltransferase (GNAT) family protein.
  
     0.768
SDN12684.1
Chorismate mutase.
  
     0.747
SDN41786.1
Hypothetical protein.
  
     0.746
SDN13133.1
Hypothetical protein.
  
     0.735
SDN60406.1
Protein of unknown function; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA.
  
     0.705
SDN48528.1
Protein of unknown function.
  
     0.699
SDN71695.1
PH domain-containing protein.
  
     0.670
SDN34171.1
Protein of unknown function.
  
     0.663
SDN52206.1
Protein of unknown function.
  
     0.662
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.