STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN48937.1Uncharacterized protein. (347 aa)    
Predicted Functional Partners:
SDN01778.1
Protein of unknown function.
  
     0.521
SDN08813.1
Protein of unknown function.
  
     0.513
SDM82686.1
PS-10 peptidase S37.
  
     0.443
SDM71588.1
Alpha-1,2-mannosidase, putative.
  
     0.425
SDM67176.1
Peptidase family M28.
  
     0.418
SDM51137.1
Necrosis inducing protein (NPP1).
  
     0.408
SDN71900.1
Alginate lyase.
 
  
  0.406
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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