STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN49411.1Probable F420-dependent oxidoreductase, MSMEG_2516 family. (295 aa)    
Predicted Functional Partners:
SDM52959.1
Amino acid adenylation domain-containing protein.
   
 0.829
SDN47500.1
Deazaflavin-dependent oxidoreductase, nitroreductase family.
  
  
 0.705
SDM43313.1
Probable F420-dependent oxidoreductase, Rv3520c family.
  
     0.697
SDN44189.1
Coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase.
 
  
 0.669
SDN44207.1
LPPG:FO 2-phospho-L-lactate transferase.
  
   
 0.669
SDM63335.1
Nitroreductase.
  
    0.609
SDM27059.1
Probable F420-dependent oxidoreductase, MSMEG_4141 family.
  
     0.585
SDN68140.1
F420-dependent oxidoreductase, G6PDH family.
  
     0.585
SDM25373.1
Deazaflavin-dependent oxidoreductase, nitroreductase family.
  
  
 0.571
SDM24194.1
Uncharacterized membrane protein YccC.
  
     0.559
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.