STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN52079.1Regulatory protein, tetR family. (256 aa)    
Predicted Functional Partners:
SDN52067.1
Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
       0.773
SDM41723.1
DNA-binding transcriptional regulator, AcrR family; Manually curated.
  
     0.741
SDM46940.1
Transcriptional regulator, TetR family.
  
     0.680
SDN52106.1
Hypothetical protein.
       0.556
SDN39553.1
DNA-binding transcriptional regulator, AcrR family.
  
     0.555
SDM56162.1
Tetracyclin repressor, C-terminal all-alpha domain.
  
     0.430
SDM32465.1
DNA-binding transcriptional regulator, AcrR family.
  
     0.427
SDN67513.1
Phytanoyl-CoA dioxygenase (PhyH).
  
     0.409
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.