STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN53782.1Barstar, RNAse (barnase) inhibitor. (96 aa)    
Predicted Functional Partners:
SDN53755.1
Guanyl-specific ribonuclease Sa.
 
   0.986
SDM95501.1
Guanyl-specific ribonuclease Sa.
 
   0.960
SDN53733.1
Hypothetical protein.
       0.747
SDN35243.1
SGNH hydrolase-like domain-containing protein, acetyltransferase AlgX.
  
     0.577
SDN13795.1
Hypothetical protein.
  
     0.534
SDN53712.1
NADPH:quinone reductase.
       0.517
SDN13792.1
Type VII secretion protein EccE.
  
     0.511
SDN44279.1
Glycosyltransferase, GT2 family.
  
     0.509
SDN68927.1
Protein of unknown function.
  
     0.491
SDN26876.1
Helix-turn-helix domain-containing protein.
  
     0.476
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.