STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN57218.1Non-specific serine/threonine protein kinase. (777 aa)    
Predicted Functional Partners:
SDM15622.1
DNA-binding transcriptional activator of the SARP family.
 
    0.949
SDM22287.1
DNA-binding transcriptional activator of the SARP family.
 
    0.717
SDN06917.1
DNA-binding transcriptional activator of the SARP family.
    0.715
SDN60066.1
DNA-binding transcriptional activator of the SARP family.
 
    0.713
SDM75124.1
DNA-binding transcriptional activator of the SARP family.
    0.678
SDM23515.1
DNA-binding transcriptional activator of the SARP family.
 
    0.672
SDM59844.1
DNA-binding transcriptional activator of the SARP family.
 
    0.668
SDM32602.1
DNA-binding transcriptional activator of the SARP family.
 
    0.664
SDN47599.1
DNA-binding transcriptional activator of the SARP family.
 
    0.664
SDN37840.1
DNA-binding transcriptional activator of the SARP family; Manually curated.
 
    0.647
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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