Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDM87601.1 | SDN58082.1 | SAMN04489726_3795 | SAMN04489726_7266 | Hypothetical protein. | Putative glutathione S-transferase. | 0.455 |
SDN47453.1 | SDN58082.1 | SAMN04489726_6770 | SAMN04489726_7266 | F5/8 type C domain-containing protein. | Putative glutathione S-transferase. | 0.455 |
SDN56288.1 | SDN58082.1 | SAMN04489726_7182 | SAMN04489726_7266 | Glycogen debranching enzyme (alpha-1,6-glucosidase). | Putative glutathione S-transferase. | 0.455 |
SDN57463.1 | SDN58082.1 | SAMN04489726_7236 | SAMN04489726_7266 | 2-haloacid dehalogenase. | Putative glutathione S-transferase. | 0.605 |
SDN57986.1 | SDN58006.1 | SAMN04489726_7261 | SAMN04489726_7262 | Hypothetical protein. | Hypothetical protein. | 0.669 |
SDN57986.1 | SDN58019.1 | SAMN04489726_7261 | SAMN04489726_7263 | Hypothetical protein. | Exoribonuclease R. | 0.537 |
SDN57986.1 | SDN58045.1 | SAMN04489726_7261 | SAMN04489726_7264 | Hypothetical protein. | Reduced coenzyme F420:NADP oxidoreductase. | 0.472 |
SDN57986.1 | SDN58059.1 | SAMN04489726_7261 | SAMN04489726_7265 | Hypothetical protein. | ABC-type Fe3+-hydroxamate transport system, substrate-binding protein. | 0.530 |
SDN57986.1 | SDN58082.1 | SAMN04489726_7261 | SAMN04489726_7266 | Hypothetical protein. | Putative glutathione S-transferase. | 0.453 |
SDN58006.1 | SDN57986.1 | SAMN04489726_7262 | SAMN04489726_7261 | Hypothetical protein. | Hypothetical protein. | 0.669 |
SDN58006.1 | SDN58019.1 | SAMN04489726_7262 | SAMN04489726_7263 | Hypothetical protein. | Exoribonuclease R. | 0.722 |
SDN58006.1 | SDN58045.1 | SAMN04489726_7262 | SAMN04489726_7264 | Hypothetical protein. | Reduced coenzyme F420:NADP oxidoreductase. | 0.691 |
SDN58006.1 | SDN58059.1 | SAMN04489726_7262 | SAMN04489726_7265 | Hypothetical protein. | ABC-type Fe3+-hydroxamate transport system, substrate-binding protein. | 0.637 |
SDN58006.1 | SDN58082.1 | SAMN04489726_7262 | SAMN04489726_7266 | Hypothetical protein. | Putative glutathione S-transferase. | 0.543 |
SDN58019.1 | SDN57986.1 | SAMN04489726_7263 | SAMN04489726_7261 | Exoribonuclease R. | Hypothetical protein. | 0.537 |
SDN58019.1 | SDN58006.1 | SAMN04489726_7263 | SAMN04489726_7262 | Exoribonuclease R. | Hypothetical protein. | 0.722 |
SDN58019.1 | SDN58045.1 | SAMN04489726_7263 | SAMN04489726_7264 | Exoribonuclease R. | Reduced coenzyme F420:NADP oxidoreductase. | 0.734 |
SDN58019.1 | SDN58059.1 | SAMN04489726_7263 | SAMN04489726_7265 | Exoribonuclease R. | ABC-type Fe3+-hydroxamate transport system, substrate-binding protein. | 0.735 |
SDN58019.1 | SDN58082.1 | SAMN04489726_7263 | SAMN04489726_7266 | Exoribonuclease R. | Putative glutathione S-transferase. | 0.655 |
SDN58045.1 | SDN57986.1 | SAMN04489726_7264 | SAMN04489726_7261 | Reduced coenzyme F420:NADP oxidoreductase. | Hypothetical protein. | 0.472 |
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