STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN59279.1Dihydrolipoamide dehydrogenase. (456 aa)    
Predicted Functional Partners:
SDN45995.1
2-oxoglutarate decarboxylase.
 
 0.999
SDN59250.1
2-oxoglutarate dehydrogenase E2 component.
 0.998
SDM63069.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 0.996
SDN22948.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 0.996
SDM63090.1
Pyruvate dehydrogenase E1 component beta subunit.
 0.982
SDN22922.1
Pyruvate dehydrogenase E1 component beta subunit.
 0.982
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
 
 
 0.971
SDN57104.1
Pyruvate dehydrogenase E1 component beta subunit.
 0.968
SDN51027.1
Pyruvate dehydrogenase E1 component beta subunit; Manually curated.
 0.967
SDM43795.1
Dihydrolipoamide dehydrogenase.
  
  
 
0.942
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.