STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN65222.1PucR C-terminal helix-turn-helix domain-containing protein. (522 aa)    
Predicted Functional Partners:
SDN65158.1
Urate oxidase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin.
 
     0.653
SDN65196.1
2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase.
 
     0.631
SDN65241.1
3-oxoacyl-[acyl-carrier protein] reductase.
       0.623
SDN65341.1
Acyl dehydratase.
       0.623
SDN65118.1
CO or xanthine dehydrogenase, FAD-binding subunit.
 
     0.619
SDN65057.1
Xanthine dehydrogenase D subunit.
 
     0.612
alc
Allantoicase; Belongs to the allantoicase family.
 
     0.578
SDN64991.1
Allantoinase.
 
     0.577
SDN65134.1
Xanthine permease.
 
    0.563
SDN65072.1
Cytosine/adenosine deaminase.
 
     0.560
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.