STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ureCUrease. Metallo peptidase. MEROPS family M38. (569 aa)    
Predicted Functional Partners:
ureG
Urease accessory protein; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
  
 0.999
SDN65888.1
Urease accessory protein.
 
 0.999
ureB
Urease subunit beta; Belongs to the urease beta subunit family.
 0.999
ureA
Urease subunit gamma; Belongs to the urease gamma subunit family.
 0.999
ureD
Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
  
 0.958
alc
Allantoicase; Belongs to the allantoicase family.
    
  0.883
SDN38801.1
Arginase; Belongs to the arginase family.
    
  0.872
SDM83769.1
Sensor histidine kinase inhibitor, KipI family.
     
 0.837
SDN09461.1
Acetyltransferase (GNAT) family protein.
    
  0.800
SDM82224.1
Hydrogenase nickel incorporation protein HypB.
  
  
 0.765
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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