STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN69558.1DNA-binding transcriptional regulator, AcrR family. (224 aa)    
Predicted Functional Partners:
SDN69603.1
Protein of unknown function.
 
     0.940
SDN69584.1
TIGR03084 family protein.
 
     0.915
SDN69692.1
Hypothetical protein.
 
     0.905
SDN69647.1
Acetyl-CoA carboxylase, carboxyltransferase component.
 
     0.849
SDN69670.1
propionyl-CoA carboxylase alpha chain.
 
 
   0.834
SDN69621.1
acyl-CoA dehydrogenase.
 
     0.822
SDN08057.1
P-aminobenzoate N-oxygenase AurF.
  
     0.413
SDN38363.1
Hypothetical protein.
  
     0.412
SDN69704.1
Uncharacterized membrane protein YjjP, DUF1212 family.
       0.404
SDM57839.1
DNA-binding transcriptional regulator, AcrR family; Manually curated.
  
    0.401
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.