STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN70145.1Protein N-acetyltransferase, RimJ/RimL family. (181 aa)    
Predicted Functional Partners:
SDN70123.1
Lysine N6-hydroxylase.
 
  0.994
SDN70099.1
Siderophore synthetase component.
 
 
 0.967
SDM61644.1
Lysine N6-hydroxylase.
 
  0.961
SDN70167.1
Siderophore synthetase component.
 
 
 0.959
SDN70193.1
L-2,4-diaminobutyrate decarboxylase.
 
 
  0.918
SDM88819.1
Glutamate synthase (NADPH/NADH) large chain.
   
 
  0.683
SDN70218.1
Uncharacterized protein YoxC, contains an MCP-like domain.
       0.459
SDN70231.1
Hypothetical protein.
       0.459
SDM29387.1
aromatic-L-amino-acid decarboxylase.
 
 
  0.457
trpE
Anthranilate synthase component 1; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...]
  
  
 0.441
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.