STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN70415.1Transcriptional regulator, GntR family. (260 aa)    
Predicted Functional Partners:
SDN70387.1
PTS system N-acetylglucosamine-specific IIC component, Glc family.
 
   
 0.861
SDN70363.1
Phosphocarrier protein.
 
   
 0.791
SDN70454.1
PTS system N-acetylglucosamine-specific IIA component, Glc family.
 
  
 0.737
SDN70428.1
PTS system N-acetylglucosamine-specific IIB component, Glc family.
 
  
 0.670
SDN67715.1
DNA-binding transcriptional regulator, FadR family; Manually curated.
  
    0.511
SDN70342.1
Protein of unknown function.
       0.497
SDM28468.1
Predicted transcriptional regulator, ArsR family.
   
  
 0.494
SDN15259.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.490
SDM59005.1
AraC-type DNA-binding protein.
   
    0.485
SDN66081.1
Cell envelope-related function transcriptional attenuator common domain-containing protein.
   
    0.470
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.